Deniz Yörükoğlu

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

Fereydoun Hormozdiari, Iman Hajirasouliha, Phuong Dao et al. · Bioinformatics · 2010 · 217 citations · Full text

<i>Alu</i> repeat discovery and characterization within human genomes

Fereydoun Hormozdiari, Can Alkan, Mario Ventura et al. · Genome Research · 2010 · 105 citations · Full text

Fast genotyping of known SNPs through approximate <i>k</i> -mer matching

Ariya Shajii, Deniz Yörükoğlu, Yun William Yu et al. · Bioinformatics · 2016 · 67 citations · Full text

Traversing the k-mer Landscape of NGS Read Datasets for Quality Score Sparsification

Yun William Yu, Deniz Yörükoğlu, Bonnie Berger · Lecture notes in computer science · 2014 · 26 citations · Full text

K-mer Landscape, Engineering, Data Science +13

Improved haplotype inference by exploiting long-range linking and allelic imbalance in RNA-seq datasets

Emily Berger, Deniz Yörükoğlu, Lillian Zhang et al. · Nature Communications · 2020 · 22 citations · Full text

Genetics, Linkage Analysis, Genomics +24