PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update

Pawel Durek, Robert Schmidt, Joshua L. Heazlewood, +5

Nucleic Acids Research

Molecular BiologyBioinformatics DatabasePlant Molecular BiologyDynamic BehaviorBiological Network Visualization +17

MASCP Gator: An Aggregation Portal for the Visualization of Arabidopsis Proteomics Data

Hiren J. Joshi, Matthias Hirsch‐Hoffmann, Katja Baerenfaller, +19

PLANT PHYSIOLOGY

Mascp GatorAggregation PortalGeneticsGenomicsBioinformatics Database +17

Maximum Common Substructure Searching in Combinatorial Make-on-Demand Compound Spaces

Robert Schmidt, Raphael Klein, Matthias Rarey

Journal of Chemical Information and Modeling

Mathematical ProgrammingCombinatorial ChemistryEngineeringCombinatorial DesignMolecular Biology +17

Comparing Molecular Patterns Using the Example of SMARTS: Theory and Algorithms

Robert Schmidt, Emanuel S. R. Ehmki, Farina Ohm, +3

Journal of Chemical Information and Modeling

EngineeringStructural Pattern RecognitionSmarts PatternsPattern DiscoveryMolecular Biology +19

LPFC: An internet library of protein family core structures

Robert Schmidt, Russ B. Altman, Mark Gerstein

Protein Science

SMARTS.plus – A Toolbox for Chemical Pattern Design

Christiane Ehrt, Bennet Krause, Robert Schmidt, +2

Molecular Informatics

EngineeringChemical AnalysisHit IdentificationSoftware ToolsPattern Discovery +21

Comparing Molecular Patterns Using the Example of SMARTS: Applications and Filter Collection Analysis

Emanuel S. R. Ehmki, Robert Schmidt, Farina Ohm, +1

Journal of Chemical Information and Modeling

EngineeringHit IdentificationSimilarity MeasurePattern DiscoveryPattern Mining +24

The Torsion Library: Semiautomated Improvement of Torsion Rules with SMARTScompare

Patrick Penner, Wolfgang Guba, Robert Schmidt, +3

Journal of Chemical Information and Modeling

Torsion LibraryCrystal StructureEngineeringBiomolecular Structure PredictionVerification +17

Index-Based Searching of Interaction Patterns in Large Collections of Protein–Ligand Interfaces

Therese Inhester, Stefan Bietz, Matthias Hilbig, +2

Journal of Chemical Information and Modeling

Large CollectionsMolecular BiologySqlite DatabaseInteraction PatternsMolecular Recognition +17

Disconnected Maximum Common Substructures under Constraints

Robert Schmidt, Florian Krull, Anna Lina Heinzke, +1

Journal of Chemical Information and Modeling

Mathematical ProgrammingEngineeringMaximum Common SubstructureCombinatorial DesignMolecular Biology +21