Oliver Schwengers

Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification

Oliver Schwengers, Lukas Jelonek, Marius Alfred Dieckmann et al. · Microbial Genomics · 2021 · 1.3K citations · Full text

Life Sciences, Bioinformatics, Microbiology +16

Platon: identification and characterization of bacterial plasmid contigs in short-read draft assemblies exploiting protein sequence-based replicon distribution scores

Oliver Schwengers, Patrick Barth, Linda Falgenhauer et al. · Microbial Genomics · 2020 · 219 citations · Full text

Life Sciences, Genetics, Microbiology +17

Prediction of antimicrobial resistance based on whole-genome sequencing and machine learning

Yunxiao Ren, Trinad Chakraborty, Swapnil Doijad et al. · Bioinformatics · 2021 · 208 citations · Full text

Life Sciences, Infectious Diseases, Microbiology +17

Detection and Characterization of ESBL-Producing Escherichia coli From Humans and Poultry in Ghana

Linda Falgenhauer, Can Imirzalioglu, Kwabena Oppong et al. · Frontiers in Microbiology · 2019 · 170 citations · Full text

Veterinary Medicine, Infectious Diseases, Microbiology +17

ASA3P: An automatic and scalable pipeline for the assembly, annotation and higher-level analysis of closely related bacterial isolates

Oliver Schwengers, Andreas Hoek, Moritz Fritzenwanker et al. · PLoS Computational Biology · 2020 · 101 citations · Full text

Life Sciences, Bioinformatics, Microbiology +14