Louis B. Kuemmerle

Squidpy: a scalable framework for spatial omics analysis

Giovanni Palla, Hannah Spitzer, Michal Klein et al. · Nature Methods · 2022 · 955 citations · Full text

Distinct molecular profiles of skull bone marrow in health and neurological disorders

Zeynep Ilgin Kolabas, Louis B. Kuemmerle, Robert Perneczky et al. · Cell · 2023 · 125 citations · Full text

Skull Bone Marrow, Immunology, Blood Cell +25

Squidpy: a scalable framework for spatial single cell analysis

Giovanni Palla, Hannah Spitzer, Michal Klein et al. · 2021 · 69 citations · Full text

Engineering, Spatial Omics, Trajectory Analysis +17

Optimizing Xenium In Situ data utility by quality assessment and best practice analysis workflows

Sergio Marco Salas, Paulo Czarnewski, Louis B. Kuemmerle et al. · 2023 · 66 citations · Full text

Engineering, Data Preparation, Multiomics +26

Optimizing Xenium In Situ data utility by quality assessment and best-practice analysis workflows

Sergio Marco Salas, Louis B. Kuemmerle, Christoffer Mattsson-Langseth et al. · Nature Methods · 2025 · 61 citations · Full text