Justin P. Shaffer

Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions

Lian Narunsky-Haziza, Gregory D. Sepich‐Poore, Ilana Livyatan et al. · Cell · 2022 · 504 citations · Full text

Life Sciences, Microbiology, Oncology +16

Consumption of Fermented Foods Is Associated with Systematic Differences in the Gut Microbiome and Metabolome

Bryn C. Taylor, Franck Lejzerowicz, Marion Poirel et al. · mSystems · 2020 · 198 citations · Full text

Life Sciences, Microbiology, Nutrition +17

Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity

Justin P. Shaffer, Louis‐Félix Nothias, Luke Thompson et al. · Nature Microbiology · 2022 · 183 citations · Full text

Life Sciences, Biology, Microbiology +17

Gut microbiome composition in the Hispanic Community Health Study/Study of Latinos is shaped by geographic relocation, environmental factors, and obesity

Robert C. Kaplan, Zheng Wang, Mykhaylo Usyk et al. · Genome biology · 2019 · 181 citations · Full text

Life Sciences, Community Health, Microbiology +17

Ultralow-input single-tube linked-read library method enables short-read second-generation sequencing systems to routinely generate highly accurate and economical long-range sequencing information

Zhoutao Chen, Long Pham, Tsai-Chin Wu et al. · Genome Research · 2020 · 133 citations · Full text

Life Sciences, Biotechnology, Genetics +17