Standards for the classification of pathogenicity of somatic variants in cancer (oncogenicity): Joint recommendations of Clinical Genome Resource (ClinGen), Cancer Genomics Consortium (CGC), and Variant Interpretation for Cancer Consortium (VICC)

Peter Horak, Malachi Griffith, Arpad Danos, +44

Genetics in Medicine

OncologyCancer ConsortiumSomatic VariantTumor HeterogeneityMedicine +9

Overview of the interactive task in BioCreative V

Wang Qing-hua, Shabbir Syed-Abdul, Lara Almeida, +53

Database

EngineeringCollaborative Information RetrievalIntelligent Information RetrievalInteractive SearchText Mining +19

A virtual molecular tumor board to improve efficiency and scalability of delivering precision oncology to physicians and their patients

Michael J. Pishvaian, Edik M. Blais, R Joseph Bender, +16

JAMIA Open

Structural and functional studies of S-adenosyl-L-methionine binding proteins: a ligand-centric approach

Rajaram Gana, Shruti Rao, Hongzhan Huang, +2

BMC Structural Biology

Discovery of Metabolic Biomarkers for Duchenne Muscular Dystrophy within a Natural History Study

Simina M. Boca, Maki Nishida, Michael A. Harris, +12

PLoS ONE

Metabolomic ProfilingNatural History StudyBiomarker (Medicine)Dmd PatientsSkeletal Muscle +18

CIViCdb 2022: evolution of an open-access cancer variant interpretation knowledgebase

Kilannin Krysiak, Arpad Danos, Jason Saliba, +60

Nucleic Acids Research

Genomic Profiling Reveals the Potential Role of TCL1A and MDR1 Deficiency in Chemotherapy-Induced Cardiotoxicity

Timothy A. McCaffrey, Constantine Tziros, Jannet F. Lewis, +15

International Journal of Biological Sciences

Culture-Independent Raman Spectroscopic Identification of Bacterial Pathogens from Clinical Samples Using Deep Transfer Learning

Saumya Singh, Dipak Kumbhar, Dhanya Reghu, +8

Analytical Chemistry

EngineeringMachine LearningPathogen DetectionAntimicrobial SusceptibilityMedicine +13

In silico analysis of autoimmune diseases and genetic relationships to vaccination against infectious diseases

Peter B. McGarvey, Barış Ethem Süzek, James N. Baraniuk, +6

BMC Immunology

iTextMine: integrated text-mining system for large-scale knowledge extraction from the literature

Jia Ren, Gang Li, Karen Ross, +7

Database

Large-scale Knowledge ExtractionEngineeringKnowledge ExtractionSemantic WebBioinformatics Database +23