Nad’a Špačková - Concepedia

Author

Nad’a Špačková

Czech Academy of Sciences, Institute of Biophysics

Also Known As

Judit E. Šponer, N. Spackova, N. Špačková, Nad'a Špačková, Nada Spackova, Nad’a Špačková, Naďa Špacková, Naďa Špačková

Publications

3.1K

Citations

H-Index

Concepts

All Affiliations

Czech Academy of Sciences, Institute of Biophysics Czech Academy of Sciences Masaryk University Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry University of Utah

NŠ

About

Nad’a Špačková is an author at Czech Academy of Sciences, Institute of Biophysics specializing in molecular biology, structural biology, and molecular dynamics.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Natural Sciences	14	14	884
2	Medicine	13	13	1.1K
3	Engineering	9	9	1K
4	Biochemistry	6	6	264
5	Biomolecular Engineering	1	1	83

Nad’a Špačková

Publications

2.8K

Citations

H-Index

Page 1

	Year	Citations
A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA Richard Lavery, K. Zakrzewska, David L. Beveridge, Nucleic Acids Research	2009	309
μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA Marco Pasi, John H. Maddocks, David L. Beveridge, Nucleic Acids Research EngineeringStructural BioinformaticsGeneticsDna AnalysisMolecular Biology	2014	213
Nanosecond Molecular Dynamics Simulations of Parallel and Antiparallel Guanine Quadruplex DNA Molecules Nad’a Špačková, Imre Berger Journal of the American Chemical Society Dna NanotechnologyEngineeringIon ChannelCentral Ion ChannelOligonucleotide	1999	173
Molecular Dynamics Simulations and Thermodynamics Analysis of DNA−Drug Complexes. Minor Groove Binding between 4‘,6-Diamidino-2-phenylindole and DNA Duplexes in Solution Nad’a Špačková, Thomas E. Cheatham, Filip Ryjáček, Journal of the American Chemical Society	2003	158
Formation Pathways of a Guanine-Quadruplex DNA Revealed by Molecular Dynamics and Thermodynamic Analysis of the Substates Richard Štefl, Thomas E. Cheatham, Nad’a Špačková, Biophysical Journal ChromatinDna NanotechnologyDnaEngineeringBiophysics	2003	137
Single Stranded Loops of Quadruplex DNA As Key Benchmark for Testing Nucleic Acids Force Fields Eva Fadrná, Nad’a Špačková, Joanna Sarzyńska, Journal of Chemical Theory and Computation Quadruplex DnaDnaDna AnalysisMolecular BiologyAmber Force Field	2009	126
Molecular Dynamics Simulations of Guanine Quadruplex Loops: Advances and Force Field Limitations Eva Fadrná, Nad’a Špačková, Richard Štefl, Biophysical Journal Guanine Quadruplex LoopsEngineeringForce Field LimitationsPhysicsNatural Sciences	2004	118
Non-Watson-Crick Basepairing and Hydration in RNA Motifs: Molecular Dynamics of 5S rRNA Loop E Kamila Réblová, Nad’a Špačková, Richard Štefl, Biophysical Journal EngineeringProtein FoldingRna Structure PredictionRrna Loop ERna Biology	2003	116
Relative Stability of Different DNA Guanine Quadruplex Stem Topologies Derived Using Large-Scale Quantum-Chemical Computations Arnošt Mládek, Nad’a Špačková, Xiaohui Cang, Journal of the American Chemical Society Dna NanotechnologyNatural SciencesDna ReplicationMolecular BiologyIntrinsic Stability	2013	113
Molecular dynamics simulations and their application to four-stranded DNA Nad’a Špačková Methods	2007	107

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