Karim Beguir

Nucleotide Transformer: building and evaluating robust foundation models for human genomics

Hugo Dalla-Torre, Liam Gonzalez, Javier Mendoza‐Revilla et al. · Nature Methods · 2024 · 380 citations · Full text

Life Sciences, Bioinformatics, Genetics +10

The Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

Hugo Dalla-Torre, Liam Gonzalez, Javier Mendoza‐Revilla et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2023 · 200 citations · Full text

Life Sciences, Bioinformatics, Genetics +14

A foundational large language model for edible plant genomes

Javier Mendoza‐Revilla, Evan Trop, Liam Gonzalez et al. · Communications Biology · 2024 · 75 citations · Full text

Life Sciences, Plant Biology, Plant Sciences +17

Early computational detection of potential high-risk SARS-CoV-2 variants

Karim Beguir, Marcin J. Skwark, Yunguan Fu et al. · Computers in Biology and Medicine · 2023 · 44 citations · Full text

Life Sciences, Bioinformatics, Infectious Diseases +14

Ranked Reward: Enabling Self-Play Reinforcement Learning for Combinatorial Optimization

Alexandre Laterre, Yunguan Fu, Mohamed Khalil Jabri et al. · arXiv (Cornell University) · 2018 · 39 citations · Full text

Computing, Computer Science, Algorithms +16