Concepedia

Jouni Sirén

JS

24

Publications

3.3K

Citations

18

H-Index

2010

Active since

Affiliations

University of California, Santa Cruz(Current)

Washington University in St. Louis

University of Tennessee Health Science Center

Google (United States)

National Institutes of Health

Jouni Sirén is an author at University of California, Santa Cruz specializing in genetics, genomics, and bioinformatics.

Top concepts

GeneticsGenomicsMedicineBioinformaticsComputational BiologyEngineeringPhylogeneticsGenetic VariationData ScienceNatural Sciences

Publications per year

2010–2024

24

Publications

24

A draft human pangenome reference

Wen‐Wei Liao, Mobin Asri, Jana Ebler et al. · Nature · 2023 · 1K citations · Full text

Pangenomics enables genotyping of known structural variants in 5202 diverse genomes

Jouni Sirén, Jean Monlong, Xian Chang et al. · Science · 2021 · 386 citations · Full text

Genetics, Molecular Genetics, Genomics +21

Indexing Graphs for Path Queries with Applications in Genome Research

Jouni Sirén, Niko Välimäki, Veli Mäkinen · IEEE/ACM Transactions on Computational Biology and Bioinformatics · 2014 · 319 citations

Burrows-wheeler Transform, Genetics, Generic Approach +23

Genotyping structural variants in pangenome graphs using the vg toolkit

Glenn Hickey, David N. Heller, Jean Monlong et al. · Genome biology · 2020 · 319 citations · Full text

Pangenome graph construction from genome alignments with Minigraph-Cactus

Glenn Hickey, Jean Monlong, Jana Ebler et al. · Nature Biotechnology · 2023 · 265 citations · Full text

Pangenome Graph Construction, Phylogenetics, Molecular Ecology +8

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