Naoki Kubo

Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation

Naoki Kubo, Haruhiko Ishii, Xiong Xiong et al. · Nature Structural & Molecular Biology · 2021 · 294 citations · Full text

Transcriptional Regulation, Genetics, Gene Regulation +5

Joint profiling of DNA methylation and chromatin architecture in single cells

Guoqiang Li, Yaping Liu, Yanxiao Zhang et al. · Nature Methods · 2019 · 238 citations

Chromatin, Functional Genomics, Joint Profiling +13

CTCF mediates chromatin looping via N-terminal domain-dependent cohesin retention

Elena M. Pugacheva, Naoki Kubo, Dmitri Loukinov et al. · Proceedings of the National Academy of Sciences · 2020 · 232 citations · Full text

Chromatin, Transcriptional Regulation, Chromatin Structure +14

An atlas of gene regulatory elements in adult mouse cerebrum

Yang Eric Li, Xiaomeng Hou, Ziyang Zhang et al. · Nature · 2021 · 194 citations · Full text

DNA methylation and gene expression dynamics during spermatogonial stem cell differentiation in the early postnatal mouse testis

Naoki Kubo, Hidehiro Toh, Kenjiro Shirane et al. · BMC Genomics · 2015 · 139 citations · Full text