Alireza Karbalayghareh

An encyclopedia of enhancer-gene regulatory interactions in the human genome

Andreas R. Gschwind, Kristy S. Mualim, Alireza Karbalayghareh et al. · 2023 · 102 citations · Full text

Optimal Bayesian Transfer Learning

Alireza Karbalayghareh, Xiaoning Qian, Edward R. Dougherty · IEEE Transactions on Signal Processing · 2018 · 78 citations · Full text

Chromatin interaction–aware gene regulatory modeling with graph attention networks

Alireza Karbalayghareh, Merve Şahin, Christina S. Leslie · Genome Research · 2022 · 62 citations · Full text

Genetics, Gene Regulatory Network, Transcriptional Regulation +20

Epiphany: predicting Hi-C contact maps from 1D epigenomic signals

Rui Yang, Arnav Das, Vianne R. Gao et al. · Genome biology · 2023 · 49 citations · Full text

Bayesian multi-domain learning for cancer subtype discovery from next-generation sequencing count data

Ehsan Hajiramezanali, Siamak Zamani Dadaneh, Alireza Karbalayghareh et al. · arXiv (Cornell University) · 2018 · 31 citations · Full text

Count Data, Machine Learning, Engineering +21