Bruno Alvarez

NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data

Birkir Reynisson, Bruno Alvarez, Sinu Paul et al. · Nucleic Acids Research · 2020 · 2.3K citations · Full text

Life Sciences, Bioinformatics, Immunology +17

GibbsCluster: unsupervised clustering and alignment of peptide sequences

Massimo Andreatta, Bruno Alvarez, Morten Nielsen · Nucleic Acids Research · 2017 · 258 citations · Full text

Life Sciences, Biochemistry, Bioinformatics +17

NNAlign_MA; MHC Peptidome Deconvolution for Accurate MHC Binding Motif Characterization and Improved T-cell Epitope Predictions

Bruno Alvarez, Birkir Reynisson, Carolina Barra et al. · Molecular & Cellular Proteomics · 2019 · 132 citations · Full text

Life Sciences, Bioinformatics, Immunology +17

Footprints of antigen processing boost MHC class II natural ligand predictions

Carolina Barra, Bruno Alvarez, Sinu Paul et al. · Genome Medicine · 2018 · 103 citations · Full text

Life Sciences, Bioinformatics, Immunology +17

Accurate MHC Motif Deconvolution of Immunopeptidomics Data Reveals a Significant Contribution of DRB3, 4 and 5 to the Total DR Immunopeptidome

Saghar Kaabinejadian, Carolina Barra, Bruno Alvarez et al. · Frontiers in Immunology · 2022 · 92 citations · Full text

Life Sciences, Immunology, Molecular Biology +17