Jonathan Stokes

A Deep Learning Approach to Antibiotic Discovery

Jonathan Stokes, Kevin Yang, Kyle Swanson et al. · Cell · 2020 · 2K citations · Full text

Antimicrobial Drug Discovery, Antimicrobial Susceptibility, Antibiotics +8

Discovery of a structural class of antibiotics with explainable deep learning

Felix Wong, Erica J. Zheng, Jacqueline A. Valeri et al. · Nature · 2023 · 356 citations · Full text

Antimicrobial Drug Discovery, Antimicrobial Resistance Gene, Antibiotics +12

Pentamidine sensitizes Gram-negative pathogens to antibiotics and overcomes acquired colistin resistance

Jonathan Stokes, Craig R. MacNair, Bushra Ilyas et al. · Nature Microbiology · 2017 · 338 citations · Full text

Antimicrobial Susceptibility, Antibiotics, Medicine +8

Clinically relevant mutations in core metabolic genes confer antibiotic resistance

Allison J. Lopatkin, Sarah C. Bening, Abigail L. Manson et al. · Science · 2021 · 335 citations · Full text

Overcoming mcr-1 mediated colistin resistance with colistin in combination with other antibiotics

Craig R. MacNair, Jonathan Stokes, Lindsey A. Carfrae et al. · Nature Communications · 2018 · 286 citations · Full text

Antimicrobial Resistance Gene, Antimicrobial Susceptibility, Health Sciences +13