Mahmudur Rahman Hera

Lightweight compositional analysis of metagenomes with FracMinHash and minimum metagenome covers

Luiz Irber, Phillip Brooks, Taylor Reiter et al. · bioRxiv (Cold Spring Harbor Laboratory) · 2022 · 75 citations · Full text

Life Sciences, Bioinformatics, Microbiology +14

sourmash v4: A multitool to quickly search, compare,and analyze genomic and metagenomic data sets

Luiz Irber, N. Tessa Pierce‐Ward, Mohamed Abuelanin et al. · The Journal of Open Source Software · 2024 · 57 citations · Full text

Life Sciences, Bioinformatics, Genomic Data Analysis +10

Deriving confidence intervals for mutation rates across a wide range of evolutionary distances using FracMinHash

Mahmudur Rahman Hera, N. Tessa Pierce‐Ward, David Koslicki · Genome Research · 2023 · 35 citations · Full text

Life Sciences, Biology, Evolutionary Biology +8

Debiasing FracMinHash and deriving confidence intervals for mutation rates across a wide range of evolutionary distances

Mahmudur Rahman Hera, N. Tessa Pierce‐Ward, David Koslicki · bioRxiv (Cold Spring Harbor Laboratory) · 2022 · 12 citations · Full text

Life Sciences, Biology, Evolutionary Biology +8

Metagenomic functional profiling: to sketch or not to sketch?

Mahmudur Rahman Hera, Shaopeng Liu, Wei Wei et al. · Bioinformatics · 2024 · 12 citations · Full text

Life Sciences, Bioinformatics, Microbiology +15