Richard Hughey

Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure

Julian Gough, Kevin Karplus, Richard Hughey et al. · Journal of Molecular Biology · 2001 · 1.2K citations

Functional Genomics, Structural Bioinformatics, Natural Sciences +13

Hidden Markov models for detecting remote protein homologies.

Kevin Karplus, Curtis L. Barrett, Richard Hughey · Bioinformatics · 1998 · 1.1K citations · Full text

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

Jong Moon Park, Kevin Karplus, Christian Barrett et al. · Journal of Molecular Biology · 1998 · 556 citations

Bioinformatics, Sequence Motif, Phylogenetics +15

Hidden Markov models for sequence analysis: extension and analysis of the basic method

Richard Hughey, Anders Krogh · Computer applications in the biosciences · 1996 · 440 citations · Full text

Engineering, Machine Learning, Markov Chain Monte Carlo +27

Stochastic context-free grammers for tRNA modeling

Yasubumi Sakakibara, Michael P. Brown, Richard Hughey et al. · Nucleic Acids Research · 1994 · 389 citations · Full text