Amr M. Alexandari

Base-resolution models of transcription-factor binding reveal soft motif syntax

Žiga Avsec, Melanie Weilert, Avanti Shrikumar et al. · Nature Genetics · 2021 · 646 citations · Full text

Sequence Motif, Natural Sciences, Molecular Biology +5

Opportunities and obstacles for deep learning in biology and medicine

Travers Ching, Daniel Himmelstein, Brett K. Beaulieu‐Jones et al. · 2017 · 309 citations · Full text

Convolutional Neural Network, Engineering, Machine Learning +18

Short tandem repeats bind transcription factors to tune eukaryotic gene expression

Connor A. Horton, Amr M. Alexandari, Michael G.B. Hayes et al. · Science · 2023 · 180 citations

Base-resolution models of transcription factor binding reveal soft motif syntax

Žiga Avsec, Melanie Weilert, Avanti Shrikumar et al. · 2019 · 39 citations · Full text

Engineering, Genetics, Molecular Biology +19

Maximum Likelihood with Bias-Corrected Calibration is Hard-To-Beat at Label Shift Adaptation

Amr M. Alexandari, Anshul Kundaje, Avanti Shrikumar · arXiv (Cornell University) · 2019 · 32 citations · Full text

Engineering, Machine Learning, Shift Detection +21