Bert Bogaerts

Targeting the 16S rRNA Gene for Bacterial Identification in Complex Mixed Samples: Comparative Evaluation of Second (Illumina) and Third (Oxford Nanopore Technologies) Generation Sequencing Technologies

Raf Winand, Bert Bogaerts, Stefan Hoffman et al. · International Journal of Molecular Sciences · 2019 · 209 citations · Full text

Biology, Microbial Diversity, Microbial Systematics +12

Closing the gap: Oxford Nanopore Technologies R10 sequencing allows comparable results to Illumina sequencing for SNP-based outbreak investigation of bacterial pathogens

Bert Bogaerts, An Van den Bossche, Bavo Verhaegen et al. · Journal of Clinical Microbiology · 2024 · 68 citations · Full text

Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center: Neisseria meningitidis as a Proof-of-Concept

Bert Bogaerts, Raf Winand, Qiang Fu et al. · Frontiers in Microbiology · 2019 · 56 citations · Full text

Large diversity of linezolid-resistant isolates discovered in food-producing animals through linezolid selective monitoring in Belgium in 2019

Timmermans Michaël, Bert Bogaerts, Kevin Vanneste et al. · Journal of Antimicrobial Chemotherapy · 2021 · 50 citations · Full text

Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin-producing Escherichia coli isolates

Stéphanie Nouws, Bert Bogaerts, Bavo Verhaegen et al. · Scientific Reports · 2020 · 46 citations · Full text