Alexander Rosenberg Johansen

SignalP 6.0 predicts all five types of signal peptides using protein language models

Felix Teufel, José Juan Almagro Armenteros, Alexander Rosenberg Johansen et al. · Repository for Publications and Research Data (ETH Zurich) · 2022 · 2.1K citations · Full text

Protein Secretion, Signal Recognition, Molecular Biology +21

DeepLoc 2.0: multi-label subcellular localization prediction using protein language models

Vineet Thumuluri, José Juan Almagro Armenteros, Alexander Rosenberg Johansen et al. · Nucleic Acids Research · 2022 · 641 citations · Full text

Engineering, Machine Learning, Subcellular Localization +22

An introduction to deep learning on biological sequence data: examples and solutions

Vanessa Jurtz, Alexander Rosenberg Johansen, Morten Nielsen et al. · Bioinformatics · 2017 · 162 citations · Full text

Prediction of GPI-anchored proteins with pointer neural networks

Magnús Halldór Gíslason, Henrik Nielsen, José Juan Almagro Armenteros et al. · Current Research in Biotechnology · 2021 · 159 citations · Full text

DeepLoc 2.1: multi-label membrane protein type prediction using protein language models

Marius Thrane Ødum, Felix Teufel, Vineet Thumuluri et al. · Nucleic Acids Research · 2024 · 122 citations · Full text

Structured Prediction, Engineering, Subcellular Localization +19