Daniel Cuevas

Critical Assessment of Metagenome Interpretation—a benchmark of metagenomics software

Alexander Sczyrba, Peter Hofmann, Peter Belmann et al. · Nature Methods · 2017 · 885 citations · Full text

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage

Robert A. Edwards, Alejandro A. Vega, Holly M. Norman et al. · Nature Microbiology · 2019 · 247 citations · Full text

Biology, Viral Evolution, Phylogenetics +10

Accessing the SEED Genome Databases via Web Services API: Tools for Programmers

Terry Disz, Sajia Akhter, Daniel Cuevas et al. · BMC Bioinformatics · 2010 · 125 citations · Full text

Dietary prophage inducers and antimicrobials: toward landscaping the human gut microbiome

Lance Boling, Daniel Cuevas, Juris A. Grasis et al. · Gut Microbes · 2020 · 121 citations · Full text

FOCUS: an alignment-free model to identify organisms in metagenomes using non-negative least squares

Genivaldo Gueiros Z. Silva, Daniel Cuevas, Bas E. Dutilh et al. · PeerJ · 2014 · 107 citations · Full text

Engineering, Non-negative Least Squares, Alignment-free Model +20