The mutational landscape of lethal castration-resistant prostate cancer

Catherine S. Grasso, Yi-Mi Wu, Dan R. Robinson, +24

Nature

UrologySomatic VariantGenitourinary CancerMutational LandscapeProstatic Disease

Transcriptome sequencing to detect gene fusions in cancer

Christopher A. Maher, Chandan Kumar‐Sinha, Xuhong Cao, +7

Nature

Functional GenomicsTumor HeterogeneityCancer GenomicsTranscriptomics TechnologyGene Fusions +4

Personalized Oncology Through Integrative High-Throughput Sequencing: A Pilot Study

Sameek Roychowdhury, Matthew K. Iyer, Dan R. Robinson, +24

Science Translational Medicine

Deep sequencing reveals distinct patterns of DNA methylation in prostate cancer

Jung H. Kim, Saravana M. Dhanasekaran, John R. Prensner, +18

Genome Research

Information theory applied to the sparse gene ontology annotation network to predict novel gene function

Ying Tao, Lee Sam, Jianrong Li, +2

Bioinformatics

Genomic assessment of a multikinase inhibitor, sorafenib, in a rodent model of pulmonary hypertension

Liliana Moreno‐Vinasco, Mardi Gomberg‐Maitland, Michael L. Maitland, +10

Physiological Genomics

EngineeringSorafenib TreatmentPulmonary HypertensionNormoxic Control RatsMultikinase Inhibitor +16

A Comparison of Single Molecule and Amplification Based Sequencing of Cancer Transcriptomes

Lee Sam, Doron Lipson, Tal Raz, +7

PLoS ONE

Platform Specific BiasesGeneticsMolecular BiologyTranscriptomics TechnologyGenomics +21

DISCOVERY OF PROTEIN INTERACTION NETWORKS SHARED BY DISEASES

Lee Sam, Yang Liu, Jianrong Li, +2

Protein interaction network underpins concordant prognosis among heterogeneous breast cancer signatures

James Chen, Lee Sam, Yong Huang, +5

Journal of Biomedical Informatics

Breast OncologyEngineeringMolecular BiologyTumor BiologyGene Expression Signature +18

Use of consomic rats for genomic insights into ventilator-associated lung injury

Stephanie Nonas, Liliana Moreno Vinasco, Shwu Fan, +12

American Journal of Physiology-Lung Cellular and Molecular Physiology