Kourosh Zarringhalam

Deep learning-based cross-classifications reveal conserved spatial behaviors within tumor histological images

Javad Noorbakhsh, Saman Farahmand, Ali Foroughi pour et al. · Nature Communications · 2020 · 195 citations · Full text

Deep learning trained on hematoxylin and eosin tumor region of Interest predicts HER2 status and trastuzumab treatment response in HER2+ breast cancer

Saman Farahmand, Aileen I. Fernandez, Fahad Ahmed et al. · Modern Pathology · 2021 · 152 citations · Full text

Her2+ Breast Cancer, Her2 Status, Breast Oncology +8

Integrating Chemical Footprinting Data into RNA Secondary Structure Prediction

Kourosh Zarringhalam, Michelle M. Meyer, Iván Dotú et al. · PLoS ONE · 2012 · 118 citations · Full text

Engineering, Structural Bioinformatics, Biomolecular Structure Prediction +16

Interpreting transcriptional changes using causal graphs: new methods and their practical utility on public networks

Carl Tony Fakhry, Parul Choudhary, Alex Gutteridge et al. · BMC Bioinformatics · 2016 · 40 citations · Full text

A biological network-based regularized artificial neural network model for robust phenotype prediction from gene expression data

Tianyu Kang, Wei Ding, Luoyan Zhang et al. · BMC Bioinformatics · 2017 · 40 citations · Full text