Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments

David Ashley Van Valen, Takamasa Kudo, Keara Lane, +7

PLoS Computational Biology

Convolutional Neural NetworkEngineeringMicroscopyBiomedical EngineeringSimultaneous Segmentation +21

MeCab : Yet Another Part-of-Speech and Morphological Analyzer

Takamasa Kudo

Medical Entomology and Zoology

EngineeringSpeech CorpusCorpus LinguisticsMorphological AnalyzerComputational Linguistics +9

Competing memories of mitogen and p53 signalling control cell-cycle entry

Hee Won Yang, Mingyu Chung, Takamasa Kudo, +1

Nature

Control Cell-cycle EntrySignal TransductionCell RegulationCell DivisionAutophagy +6

Robustness and Compensation of Information Transmission of Signaling Pathways

Shinsuke Uda, Takeshi Saito, Takamasa Kudo, +6

Science

EngineeringSignaling PathwaysNetwork AnalysisRobust TransmissionBiostatistics +14

Measuring Signaling and RNA-Seq in the Same Cell Links Gene Expression to Dynamic Patterns of NF-κB Activation

Keara Lane, David Van Valen, Mialy DeFelice, +8

Cell Systems

Dynamic PatternsEnvironmental SignalingTranscriptional RegulationSignal TransductionSignaling Pathway +13

DeepCell Kiosk: scaling deep learning–enabled cellular image analysis with Kubernetes

Dylan Bannon, Erick Moen, Morgan Schwartz, +9

Nature Methods

Convolutional Neural NetworkImage AnalysisMachine LearningData ScienceEngineering +5

Live-cell measurements of kinase activity in single cells using translocation reporters

Takamasa Kudo, Stevan Jeknić, Derek N. Macklin, +4

Nature Protocols

Live-cell MeasurementsSignal TransductionMedicineCell InteractionMolecular Biology +6

The role of chloride ion on the atmospheric corrosion of steel and corrosion resistance of Sn-bearing steel

Takayuki Kamimura, Kazuyuki Kashima, Kiyonobu Sugae, +1

Corrosion Science

Corrosion ProtectionChloride IonCorrosionSn-bearing SteelCorrosion Resistance

Controlling low rates of cell differentiation through noise and ultrahigh feedback

Robert Ahrends, Asuka Ota, Kyle M. Kovary, +3

Science

Effect of nickel alloying on crevice corrosion resistance of stainless steels

Shigeki Azuma, Takamasa Kudo, Masato Yamashita, +1

Corrosion Science

Materials ScienceStainless SteelsCorrosion ProtectionEngineeringCorrosion +2