Vignesh Shanmugam

Slide-tags enables single-nucleus barcoding for multimodal spatial genomics

Andrew J. C. Russell, Jackson A. Weir, Naeem Nadaf et al. · Nature · 2023 · 170 citations · Full text

Cell type-specific inference of differential expression in spatial transcriptomics

Dylan Cable, Evan Murray, Vignesh Shanmugam et al. · Nature Methods · 2022 · 154 citations · Full text

Functional Genomics, Spatial Transcriptomics, Medicine +6

Spatial maps of T cell receptors and transcriptomes reveal distinct immune niches and interactions in the adaptive immune response

Sophia Liu, J. Bryan Iorgulescu, Shuqiang Li et al. · Immunity · 2022 · 116 citations · Full text

Systems Biology, Signal Transduction, Autoimmune Disease +13

Identification of diverse activating mutations of the RAS-MAPK pathway in histiocytic sarcoma

Vignesh Shanmugam, Gabriel K. Griffin, Eric D. Jacobsen et al. · Modern Pathology · 2019 · 108 citations · Full text

Cancer Research, Ras-mapk Pathway, Medicine +9

Cyclin D1 Is Expressed in Neoplastic Cells of Langerhans Cell Histiocytosis but Not Reactive Langerhans Cell Proliferations

Vignesh Shanmugam, Jeffrey W. Craig, Jason L. Hornick et al. · The American Journal of Surgical Pathology · 2017 · 87 citations

Cell Pathology, Cyclin D1, Immunodeficiencies +30