Emu: species-level microbial community profiling of full-length 16S rRNA Oxford Nanopore sequencing data

Kristen Curry, Qi Wang, Michael Nute, +11

Nature Methods

BiologyMicrobial DiversityMicrobial SystematicsRrna Oxford NanoporeEngineering +8

Probiotics for Gastrointestinal Symptoms and Quality of Life in Autism: A Placebo-Controlled Pilot Trial

L. Eugene Arnold, Ruth Ann Luna, Kent C. Williams, +9

Journal of Child and Adolescent Psychopharmacology

Fusobacterium nucleatum Adheres to Clostridioides difficile via the RadD Adhesin to Enhance Biofilm Formation in Intestinal Mucus

Melinda A. Engevik, Heather A. Danhof, Jennifer M. Auchtung, +16

Gastroenterology

Medical MicrobiologyAntimicrobial SusceptibilityVirulence FactorRadd AdhesinFusobacterium Nucleatum Adheres +6

Common Distribution of gad Operon in Lactobacillus brevis and its GadA Contributes to Efficient GABA Synthesis toward Cytosolic Near-Neutral pH

Qinglong Wu, Hein M. Tun, Yee-Song Law, +2

Frontiers in Microbiology

Genomic insights into high exopolysaccharide-producing dairy starter bacterium Streptococcus thermophilus ASCC 1275

Qinglong Wu, Hein M. Tun, Frederick Chi-Ching Leung, +1

Scientific Reports

Bile acid-independent protection against Clostridioides difficile infection

Andrea Martinez Aguirre, Qinglong Wu, Alton G. Swennes, +5

PLoS Pathogens

DysbiosisMicrobial PathogensBile Acid-independent ProtectionBacterial PathogensProbiotic +18

Ripened Pu-erh Tea Extract Promotes Gut Microbiota Resilience against Dextran Sulfate Sodium Induced Colitis

Yina Huang, Qin Yang, Xuan Mi, +6

Journal of Agricultural and Food Chemistry

Chronic Inflammatory DiseasesDysbiosisHost-microbe InteractionsImmunologyGastroenterology +17

Towards galactose accumulation in dairy foods fermented by conventional starter cultures: Challenges and strategies

Qinglong Wu, Christine K.W. Cheung, Nagendra P. Shah

Trends in Food Science & Technology

ProbioticEngineeringFood FermentationTowards Galactose AccumulationDairy Foods +8

Restoration of GABA production machinery in Lactobacillus brevis by accessible carbohydrates, anaerobiosis and early acidification

Qinglong Wu, Nagendra P. Shah

Food Microbiology

Food FermentationLactic Acid BacteriaEarly AcidificationMicrobial PhysiologyFood Bioprocessing +4

Addressing barriers in FAIR data practices for biomedical data

Laura D. Hughes, Ginger Tsueng, Jack DiGiovanna, +9

Scientific Data

Research ReproducibilityEngineeringHealth Data SharingData PublishingResearch Ethics +18