Jared Sagendorf - Concepedia

Author

Jared Sagendorf

University of Southern California ORCID

Also Known As

Jared M Sagendorf, Jared M. Sagendorf, Jared Sagendorf

Publications

711

Citations

H-Index

Concepts

All Affiliations

University of Southern California Rutgers, The State University of New Jersey University of California, San Francisco QB3 University of Washington

About

Jared Sagendorf is an author at University of Southern California specializing in molecular biology, structural biology, and medicine.

Top Concepts

#	Concept	H-Index	Publications	Citations
1	Medicine	7	7	565
2	Natural Sciences	5	5	418
3	Engineering	3	3	231
4	Applied Physics	1	1	56
5	Biochemistry	1	1	32

Jared Sagendorf

Publications

677

Citations

H-Index

Page 1

	Year	Citations
Updated resources for exploring experimentally-determined PDB structures and Computed Structure Models at the RCSB Protein Data Bank S.K. Burley, R K Bhatt, Charmi Bhikadiya, Nucleic Acids Research Structural BioinformaticsBiomolecular Structure PredictionMolecular BiologyNew FeaturesRcsb Pdb	2024	166
Expanding the repertoire of DNA shape features for genome-scale studies of transcription factor binding Jinsen Li, Jared Sagendorf, Tsu-Pei Chiu, Nucleic Acids Research Structural BioinformaticsBiomolecular Structure PredictionGeneticsMolecular BiologyDna Shape Features	2017	113
DNAproDB: an interactive tool for structural analysis of DNA–protein complexes Jared Sagendorf, Helen M. Berman, Remo Rohs Nucleic Acids Research EngineeringStructural BioinformaticsMolecular BiologyBioinformatics DatabaseBiological Network Visualization	2017	91
DNAproDB: an expanded database and web-based tool for structural analysis of DNA–protein complexes Jared Sagendorf, Nicholas Markarian, Helen M. Berman, Nucleic Acids Research EngineeringStructural BioinformaticsBiomolecular Structure PredictionMolecular BiologyBioinformatics Database	2019	84
Direct Atom-by-Atom Chemical Identification of Nanostructures and Defects of Topological Insulators Ying Jiang, Yong Wang, Jared Sagendorf, Nano Letters EngineeringTopological MaterialsChemistryTopological Quantum StateElectronic Structure	2013	56
Structure of the Forkhead Domain of FOXA2 Bound to a Complete DNA Consensus Site Jun Li, Ana Carolina Dantas Machado, Ming Guo, Biochemistry ChromatinForkhead ConsensusStructural BioinformaticsNatural SciencesGenetics	2017	51
Geometric deep learning of protein–DNA binding specificity Raktim Mitra, Jinsen Li, Jared Sagendorf, Nature Methods	2024	46
DNAproDB: an updated database for the automated and interactive analysis of protein–DNA complexes Raktim Mitra, Ari S Cohen, Jared Sagendorf, Nucleic Acids Research Structural BioinformaticsMolecular BiologyProtein–dna ComplexesBioinformatics DatabaseBiological Network Visualization	2024	32
Experimental maps of DNA structure at nucleotide resolution distinguish intrinsic from protein-induced DNA deformations Robert N. Azad, Dana Zafiropoulos, Douglas Ober, Nucleic Acids Research DnaStructural BioinformaticsBiomolecular Structure PredictionGeneticsDna Analysis	2018	28
IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods Brinda Vallat, Benjamin Webb, John Westbrook, Journal of Molecular Biology	2024	10

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