Community proteogenomics reveals insights into the physiology of phyllosphere bacteria

Nathanaël Delmotte, Claudia Knief, Samuel Chaffron, +5

Proceedings of the National Academy of Sciences

EngineeringAerial Plant SurfacesMolecular EcologyMicrobial EcologyEnvironmental Microbiology +14

Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions

Thomas Schneider, Katharina Keiblinger, Emanuel Schmid, +6

The ISME Journal

Altered Activation of Endothelial Anti- and Proapoptotic Pathways by High-Density Lipoprotein from Patients with Coronary Artery Disease

Meliana Riwanto, Lucia Rohrer, Bernd Roschitzki, +9

Circulation

Phosphoproteomic Analysis Reveals Interconnected System-Wide Responses to Perturbations of Kinases and Phosphatases in Yeast

Bernd Bodenmiller, Stefanie Wanka, Claudine Kraft, +19

Science Signaling

System-wide ResponsesMolecular BiologyPhosphoproteomic Analysis RevealsEssential Regulatory NetworkSteady State +17

PARP1 ADP-ribosylates lysine residues of the core histone tails

Simon Messner, Matthias Altmeyer, Hongtao Zhao, +7

Nucleic Acids Research

Protein ChemistryChromatinCore Histone TailsProtein FunctionChromatin Structure +13

Identification of Proteins Associated with the <i>Pseudomonas aeruginosa</i> Biofilm Extracellular Matrix

Masanori Toyofuku, Bernd Roschitzki, Katharina Riedel, +1

Journal of Proteome Research

BiofilmsProteins AssociatedOuter Membrane VesiclesGram-negative BacteriologyPathogenic Microbiology +9

Identification and Functional Characterization of N-Terminally Acetylated Proteins in Drosophila melanogaster

Sandra Goetze, Ermir Qeli, Christian Mosimann, +15

PLoS Biology

Deterministic protein inference for shotgun proteomics data provides new insights into <i>Arabidopsis</i> pollen development and function

Monica A. Grobei, Ermir Qeli, Erich Brunner, +6

Genome Research

Soil metaproteomics – Comparative evaluation of protein extraction protocols

Katharina Keiblinger, Inés C. Wilhartitz, Thomas Schneider, +4

Soil Biology and Biochemistry

Implementation and evaluation of relative and absolute quantification in shotgun proteomics with label-free methods

Jonas Grossmann, Bernd Roschitzki, Christian Panse, +4

Journal of Proteomics

Functional GenomicsMedicineNatural SciencesMolecular BiologyLabel-free Methods +8