Large Scale Mass Spectrometry-based Identifications of Enzyme-mediated Protein Methylation Are Subject to High False Discovery Rates

Gene Hart‐Smith, Daniel Yagoub, Aidan P. Tay, +2

Molecular & Cellular Proteomics

Evaluation of Cell Cycle Arrest in Estrogen Responsive MCF-7 Breast Cancer Cells: Pitfalls of the MTS Assay

Eileen McGowan, Nikki Alling, Elise Jackson, +4

PLoS ONE

Novel N-terminal and Lysine Methyltransferases That Target Translation Elongation Factor 1A in Yeast and Human

Joshua J. Hamey, Daniel L. Winter, Daniel Yagoub, +3

Molecular & Cellular Proteomics

Systems BiologyLysine MethylationN-terminal MethylationMedicineGenetics +12

Yeast proteins Gar1p, Nop1p, Npl3p, Nsr1p, and Rps2p are natively methylated and are substrates of the arginine methyltransferase Hmt1p

Daniel Yagoub, Gene Hart‐Smith, Jonas Moecking, +2

PROTEOMICS

Epigenetic ChangeGeneticsDna MethylationMolecular BiologyMolecular Genetics +18

Annexin/S100A Protein Family Regulation through p14ARF-p53 Activation: A Role in Cell Survival and Predicting Treatment Outcomes in Breast Cancer

Diana Hatoum, Daniel Yagoub, Alireza Ahadi, +2

PLoS ONE

Annexin FamilyBreast OncologyOncologyEndocrine-related CancerP14arf-p53 Activation +13

Proteogenomic Discovery of a Small, Novel Protein in Yeast Reveals a Strategy for the Detection of Unannotated Short Open Reading Frames

Daniel Yagoub, Aidan P. Tay, Zhiliang Chen, +5

Journal of Proteome Research

Proteogenomic DiscoveryEngineeringGeneticsGenome AnnotationMolecular Biology +21

Sphingosine Kinase 1 Isoform-Specific Interactions in Breast Cancer

Daniel Yagoub, Marc R. Wilkins, Angelina J. Lay, +9

Molecular Endocrinology

Breast OncologyMolecular BiologyCancer BiologyTumor BiologySphingosine Kinase 1 +15

p14ARF Post-Transcriptional Regulation of Nuclear Cyclin D1 in MCF-7 Breast Cancer Cells: Discrimination between a Good and Bad Prognosis?

Eileen McGowan, Nham Tran, Nikki Alling, +3

PLoS ONE

Breast OncologyLatent EffectsCell CycleCancer BiologyMammary Gland Development +17

MethylQuant: A Tool for Sensitive Validation of Enzyme-Mediated Protein Methylation Sites from Heavy-Methyl SILAC Data

Aidan P. Tay, Vincent Geoghegan, Daniel Yagoub, +2

Journal of Proteome Research

Epigenetic ChangePost-translational MethylationBiological Mass SpectrometryMolecular BiologyMetabolomic Profiling +27

Knockout of the Hmt1p Arginine Methyltransferase in Saccharomyces cerevisiae Leads to the Dysregulation of Phosphate-associated Genes and Processes

Samantha Z. Chia, Yu-Wen Lai, Daniel Yagoub, +9

Molecular & Cellular Proteomics