The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements

Stefan Schoenfelder, Mayra Furlan-Magaril, Borbála Mifsud, +21

Genome Research

hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1

Yoichiro Sugimoto, Alessandra Vigilante, Élodie Darbo, +5

Nature

Vivo AtlasStructural BioinformaticsStaufen 1Protein FoldingRna Structure Prediction +5

Deciphering the complex role of thrombospondin-1 in glioblastoma development

Thomas Daubon, Céline Léon, Kim Clarke, +16

Nature Communications

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

Morgane Thomas‐Chollier, Élodie Darbo, Carl Herrmann, +3

Nature Protocols

System On ChipPhysical Design (Electronics)EngineeringData ScienceData Mining +11

Consensus clustering applied to multi-omics disease subtyping

Galadriel Brière, Élodie Darbo, Patricia Thébault, +1

BMC Bioinformatics

GOTHiC, a probabilistic model to resolve complex biases and to identify real interactions in Hi-C data

Borbála Mifsud, Iñigo Martincorena, Élodie Darbo, +4

PLoS ONE

EngineeringGeneticsReal InteractionsComplex BiasesGenomics +23

Modulation of the ATM/autophagy pathway by a G-quadruplex ligand tips the balance between senescence and apoptosis in cancer cells

Jennifer Beauvarlet, Paul Bensadoun, Élodie Darbo, +16

Nucleic Acids Research

MitophagyApoptosisCell DeathCancer BiologyEpigenetics +16

Divergent wiring of repressive and active chromatin interactions between mouse embryonic and trophoblast lineages

Stefan Schoenfelder, Borbála Mifsud, Claire E. Senner, +5

Nature Communications

Inhibition of DDR1 enhances in vivo chemosensitivity in KRAS-mutant lung adenocarcinoma

Marie‐Julie Nokin, Élodie Darbo, Camille Travert, +18

JCI Insight

ImmunologyImmunoeditingVivo ChemosensitivityCancer BiologyTumor Biology +18

Specific immune landscapes and immune checkpoint expressions in histotypes and molecular subtypes of sarcoma

A. Dufresne, Tom Lesluyes, Christine Ménétrier‐Caux, +15

OncoImmunology

Tumor BiologyLymphoid NeoplasiaCancer ImmunosurveillanceMolecular SubtypesSoft Tissue Sarcoma +13