Damla Senol Cali

GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies

Jeremie S. Kim, Damla Senol Cali, Hongyi Xin et al. · Repository for Publications and Research Data (ETH Zurich) · 2018 · 158 citations · Full text

FPGA-Based Near-Memory Acceleration of Modern Data-Intensive Applications

Gagandeep Singh, Mohammed Alser, Damla Senol Cali et al. · IEEE Micro · 2021 · 68 citations · Full text

Apollo: a sequencing-technology-independent, scalable and accurate assembly polishing algorithm

Jeremie S. Kim, Mohammed Alser, Damla Senol Cali et al. · Bioinformatics · 2020 · 63 citations · Full text

GenStore: a high-performance in-storage processing system for genome sequence analysis

Nika Mansouri Ghiasi, Jisung Park, Harun Mustafa et al. · 2022 · 62 citations

Engineering, Genetics, Genomics +17

Demystifying Complex Workload-DRAM Interactions

Saugata Ghose, Tianshi Li, Nastaran Hajinazar et al. · 2019 · 56 citations · Full text

Hardware Security, Non-volatile Memory, Complex Interaction +11