Shuwei Yao

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Naihui Zhou, Yuxiang Jiang, Timothy Bergquist et al. · Genome biology · 2019 · 459 citations · Full text

NetGO: improving large-scale protein function prediction with massive network information

Ronghui You, Shuwei Yao, Yi Xiong et al. · Nucleic Acids Research · 2019 · 160 citations · Full text

Engineering, Machine Learning, Molecular Biology +23

DeepGraphGO: graph neural network for large-scale, multispecies protein function prediction

Ronghui You, Shuwei Yao, Hiroshi Mamitsuka et al. · Bioinformatics · 2021 · 129 citations · Full text

NetGO 2.0: improving large-scale protein function prediction with massive sequence, text, domain, family and network information

Shuwei Yao, Ronghui You, Shaojun Wang et al. · Nucleic Acids Research · 2021 · 123 citations · Full text

The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Naihui Zhou, Yuxiang Jiang, Timothy Bergquist et al. · 2019 · 64 citations · Full text

New Functional Annotations, Genetics, Molecular Biology +23