LinkedOmics: analyzing multi-omics data within and across 32 cancer types

Suhas Vasaikar, Péter Straub, Jing Wang, +1

Nucleic Acids Research

EngineeringPathologyMultiomicsGenomicsCancer Types +18

WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit

Jing Wang, Suhas Vasaikar, Zhiao Shi, +2

Nucleic Acids Research

Enrichment Analysis ToolkitFunctional Enrichment AnalysisGeneticsGenomicsBioinformatics Database +20

Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities

Suhas Vasaikar, Chen Huang, Xiaojing Wang, +79

Cell

OncologyMedicineColorectal CancerPathologyCancer Genomics +5

Proteogenomic Characterization Reveals Therapeutic Vulnerabilities in Lung Adenocarcinoma

Michael A. Gillette, Shankha Satpathy, Song Cao, +183

Cell

Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma

David Clark, Saravana M. Dhanasekaran, Francesca Petralia, +221

Cell

UrologyGenitourinary CancerKidney ResearchMedicineImmunology +11

Proteogenomic and metabolomic characterization of human glioblastoma

Liang-Bo Wang, Alla Karpova, Marina Gritsenko, +235

Cancer Cell

Proteogenomic Characterization of Endometrial Carcinoma

Yongchao Dou, Emily Kawaler, Daniel Cui Zhou, +214

Cell

A proteogenomic portrait of lung squamous cell carcinoma

Shankha Satpathy, Karsten Krug, Pierre M. Jean Beltran, +159

Cell

Identification of EMT signaling cross-talk and gene regulatory networks by single-cell RNA sequencing

Abhijeet Deshmukh, Suhas Vasaikar, Katarzyna Tomczak, +9

Proceedings of the National Academy of Sciences

GeneticsTranscriptomics TechnologyGene Regulatory NetworkGenomicsCancer Biology +24

EMTome: a resource for pan-cancer analysis of epithelial-mesenchymal transition genes and signatures

Suhas Vasaikar, Abhijeet Deshmukh, Petra den Hollander, +7

British Journal of Cancer