Sander Willems

Rapid and In-Depth Coverage of the (Phospho-)Proteome With Deep Libraries and Optimal Window Design for dia-PASEF

Patricia Skowronek, Marvin Thielert, Eugenia Voytik et al. · Molecular & Cellular Proteomics · 2022 · 238 citations · Full text

In-depth Coverage, Deep Libraries, Biochemistry +12

AlphaPeptDeep: a modular deep learning framework to predict peptide properties for proteomics

Wen‐Feng Zeng, Xie‐Xuan Zhou, Sander Willems et al. · Nature Communications · 2022 · 183 citations · Full text

Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency

Guido van Mierlo, René A. M. Dirks, Laura De Clerck et al. · Cell stem cell · 2018 · 130 citations · Full text

Chromatin, Chromatin Remodeling, Epigenetic Change +7

The structural context of posttranslational modifications at a proteome-wide scale

Isabell Bludau, Sander Willems, Wenfeng Zeng et al. · PLoS Biology · 2022 · 118 citations · Full text

A comprehensive LFQ benchmark dataset on modern day acquisition strategies in proteomics

Bart Van Puyvelde, Simon Daled, Sander Willems et al. · Scientific Data · 2022 · 62 citations · Full text