Valerie Christiaens

iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections

Rekin’s Janky, Annelien Verfaillie, Hana Imrichová et al. · PLoS Computational Biology · 2014 · 967 citations · Full text

Gene List, Genetics, Molecular Biology +20

A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain

Kristofer Davie, Jasper Janssens, Duygu Koldere et al. · Cell · 2018 · 901 citations · Full text

SCENIC+: single-cell multiomic inference of enhancers and gene regulatory networks

Carmen Bravo González‐Blas, Seppe De Winter, Gert Hulselmans et al. · Nature Methods · 2023 · 579 citations · Full text

Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state

Annelien Verfaillie, Hana Imrichová, Zeynep Kalender Atak et al. · Nature Communications · 2015 · 537 citations · Full text

cisTopic: cis-regulatory topic modeling on single-cell ATAC-seq data

Carmen Bravo González‐Blas, Liesbeth Minnoye, Dafni Papasokrati et al. · Nature Methods · 2019 · 504 citations · Full text

Bioinformatics, Single Cell Sequencing, Medicine +7