Tracing the Enterococci from Paleozoic Origins to the Hospital

François Lebreton, Abigail L. Manson, José T. Saavedra, +3

Cell

Microbial DiseasePaleozoic OriginsMicrobiologyInfection ControlMedicine +2

Longitudinal multi-omics analyses link gut microbiome dysbiosis with recurrent urinary tract infections in women

Colin J. Worby, Henry L. Schreiber, Timothy J. Straub, +22

Nature Microbiology

DysbiosisMicrobiotaGut MicrobiologyVaginitisGut Microbiome Dysbiosis +7

StrainGE: a toolkit to track and characterize low-abundance strains in complex microbial communities

Lucas R. van Dijk, Bruce J. Walker, Timothy J. Straub, +9

Genome biology

Design and implementation of multiplexed amplicon sequencing panels to serve genomic epidemiology of infectious disease: A malaria case study

Emily LaVerriere, Philipp Schwabl, Manuela Carrasquilla, +19

Molecular Ecology Resources

Ampseq DataGenomic EpidemiologyMalariaGenomicsMultiplexed Amplicon +22

Probing Plasmodium falciparum sexual commitment at the single-cell level

Nicolas M. B. Brancucci, Mariana De Niz, Timothy J. Straub, +6

Wellcome Open Research

Chicken Meat-Associated Enterococci: Influence of Agricultural Antibiotic Use and Connection to the Clinic

Abigail L. Manson, Daria Van Tyne, Timothy J. Straub, +5

Applied and Environmental Microbiology

QuantTB – a method to classify mixed Mycobacterium tuberculosis infections within whole genome sequencing data

Christine Anyansi, Arlin Keo, Bruce J. Walker, +4

BMC Genomics

Horizontal Gene Acquisitions, Mobile Element Proliferation, and Genome Decay in the Host-Restricted Plant Pathogen<i>Erwinia Tracheiphila</i>

Lori R. Shapiro, Erin D. Scully, Timothy J. Straub, +9

Genome Biology and Evolution

Comparative GenomicsGeneticsPlant PathologyGenomicsMobile Element Amplification +16

Limited effects of long-term daily cranberry consumption on the gut microbiome in a placebo-controlled study of women with recurrent urinary tract infections

Timothy J. Straub, Wen‐Chi Chou, Abigail L. Manson, +12

BMC Microbiology

The Anopheles coluzzii microbiome and its interaction with the intracellular parasite Wolbachia

Timothy J. Straub, W. Robert Shaw, Perrine Marcenac, +5

Scientific Reports