Andrea Pagnani

Direct-coupling analysis of residue coevolution captures native contacts across many protein families

Faruck Morcos, Andrea Pagnani, Bryan Lunt et al. · Proceedings of the National Academy of Sciences · 2011 · 1.6K citations · Full text

Protein Domain Structures, Structural Bioinformatics, Biomolecular Structure Prediction +20

Protein 3D Structure Computed from Evolutionary Sequence Variation

Debora S. Marks, Lucy J. Colwell, Robert P. Sheridan et al. · PLoS ONE · 2011 · 1.2K citations · Full text

Protein 3D, Structural Bioinformatics, Genetics +16

Integrated transcriptional and competitive endogenous RNA networks are cross-regulated in permissive molecular environments

Ugo Ala, Florian A. Karreth, Carla Bosia et al. · Proceedings of the National Academy of Sciences · 2013 · 335 citations · Full text

A critical assessment of Mus musculusgene function prediction using integrated genomic evidence

Lourdes Peña‐Castillo, Murat Taşan, Chad L. Myers et al. · Genome biology · 2008 · 254 citations · Full text

Perturbation Biology: Inferring Signaling Networks in Cellular Systems

Evan Molinelli, Anil Korkut, Weiqing Wang et al. · PLoS Computational Biology · 2013 · 192 citations · Full text