Concepedia

Shahab Sarmashghi

SS

Statistics

Publications

7

Citations

405

H-Index

7

Active since

2019

Affiliations

University of California San Diego(Current)

Dana-Farber Cancer Institute

Van Andel Institute

Broad Institute

Harvard University

Shahab Sarmashghi is an author at University of California San Diego specializing in life sciences, genomics, and bioinformatics.

Publications per year

2019–2025

7

Publications

7

Skmer: assembly-free and alignment-free sample identification using genome skims

Shahab Sarmashghi, Kristine Bohmann, M. Thomas P. Gilbert et al. · Genome biology · 2019 · 136 citations · Full text

Life Sciences, Bioinformatics, Genetics +15

Cancer aneuploidies are shaped primarily by effects on tumour fitness

Juliann Shih, Shahab Sarmashghi, Nadja Zhakula-Kostadinova et al. · Nature · 2023 · 106 citations · Full text

Life Sciences, Cancer Biology, Genetics +14

APPLES: Scalable Distance-Based Phylogenetic Placement with or without Alignments

Metin Balaban, Shahab Sarmashghi, Siavash Mirarab · Systematic Biology · 2019 · 81 citations · Full text

Life Sciences, Bioinformatics, Biology +17

Estimating repeat spectra and genome length from low-coverage genome skims with RESPECT

Shahab Sarmashghi, Metin Balaban, Eleonora Rachtman et al. · PLoS Computational Biology · 2021 · 37 citations · Full text

Life Sciences, Bioinformatics, Biology +9

Three-dimensional genome landscape of primary human cancers

Kathryn E. Yost, Yanding Zhao, King L. Hung et al. · Nature Genetics · 2025 · 19 citations · Full text

Medicine, Genetics, Oncology +17

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