Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study

Andreas Roetzer, Roland Diel, Thomas A. Kohl, +10

PLoS Medicine

Phylogenetic characterization of a biogas plant microbial community integrating clone library 16S-rDNA sequences and metagenome sequence data obtained by 454-pyrosequencing

Magdalena Kröber, Thomas Bekel, Naryttza N. Diaz, +8

Journal of Biotechnology

BiologyMicrobial DiversityMicrobial SystematicsMedicineGenetics +8

Comparative and Joint Analysis of Two Metagenomic Datasets from a Biogas Fermenter Obtained by 454-Pyrosequencing

Sebastian Jaenicke, Christina Ander, Thomas Bekel, +11

PLoS ONE

EngineeringGeneticsIncomplete CoverageRenewable ResourcesArchaea +20

Profiling of the metabolically active community from a production-scale biogas plant by means of high-throughput metatranscriptome sequencing

Martha Zakrzewski, Alexander Goesmann, Sebastian Jaenicke, +7

Journal of Biotechnology

BiologyMetabolic NetworkEngineeringMedicineProduction-scale Biogas Plant +12

High-quality genome sequence of Pichia pastoris CBS7435

Andreas Küberl, Jessica Schneider, Gerhard Thallinger, +11

Journal of Biotechnology

Pichia Pastoris Cbs7435GeneticsYeastGenome SequencingGenomics +4

Comparative metagenomics of biogas-producing microbial communities from production-scale biogas plants operating under wet or dry fermentation conditions

Yvonne Stolze, Martha Zakrzewski, Irena Maus, +6

Biotechnology for Biofuels

Microbial diversity in different compartments of an aquaponics system

Zala Schmautz, Andreas Graber, Sebastian Jaenicke, +3

Archives of Microbiology

Microbial DiversityMicrobial EcologyEnvironmental MicrobiologyMicrobiologyMedicine +1

Unraveling the microbiome of a thermophilic biogas plant by metagenome and metatranscriptome analysis complemented by characterization of bacterial and archaeal isolates

Irena Maus, Daniela E. Koeck, Katharina Cibis, +19

Biotechnology for Biofuels

Pangenomic Study of Corynebacterium diphtheriae That Provides Insights into the Genomic Diversity of Pathogenic Isolates from Cases of Classical Diphtheria, Endocarditis, and Pneumonia

Eva Trost, Jochen Blom, Siomar de Castro Soares, +20

Journal of Bacteriology

Microbial PathogensKlebsiella PneumoniaeImmunologyBacterial PathogensParasite Genomics +20

Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid

Daniel Wibberg, Jochen Blom, Sebastian Jaenicke, +10

Journal of Biotechnology

Sequence AssemblyGeneticsSequence AnalysisMolecular BiologyTripartite Genome Consisting +7