Jason Pell

The khmer software package: enabling efficient nucleotide sequence analysis

Michael R. Crusoe, Hussien F. Alameldin, Sherine Awad et al. · F1000Research · 2015 · 424 citations · Full text

Life Sciences, Bioinformatics, Computational Biology +11

Scaling metagenome sequence assembly with probabilistic de Bruijn graphs

Jason Pell, Arend Hintze, Rosangela Canino-Koning et al. · Proceedings of the National Academy of Sciences · 2012 · 257 citations · Full text

Life Sciences, Bioinformatics, Microbiology +17

The genome and developmental transcriptome of the strongylid nematode Haemonchus contortus

Erich M. Schwarz, Pasi K. Korhonen, Bronwyn E. Campbell et al. · Genome biology · 2013 · 256 citations · Full text

Life Sciences, Genetics, Molecular Biology +17

These Are Not the K-mers You Are Looking For: Efficient Online K-mer Counting Using a Probabilistic Data Structure

Qingpeng Zhang, Jason Pell, Rosangela Canino-Koning et al. · PLoS ONE · 2014 · 118 citations · Full text

Life Sciences, Bioinformatics, Data Structures +13

The khmer software package: enabling efficient sequence analysis

C. Titus Brown, Michael R. Crusoe, Greg Edvenson et al. · Figshare · 2014 · 19 citations

Life Sciences, Bioinformatics, Computational Biology +10