Johnny Israeli

Opportunities and obstacles for deep learning in biology and medicine

Travers Ching, Daniel Himmelstein, Brett K. Beaulieu‐Jones et al. · 2017 · 309 citations · Full text

Convolutional Neural Network, Engineering, Machine Learning +18

Matrix stiffness induces a tumorigenic phenotype in mammary epithelium through changes in chromatin accessibility

Ryan S. Stowers, Anna Shcherbina, Johnny Israeli et al. · Nature Biomedical Engineering · 2019 · 220 citations

Chromatin, Chromatin Accessibility, Chromatin Structure +14

Deep learning-based enhancement of epigenomics data with AtacWorks

Avantika Lal, Zachary Chiang, Nikolai Yakovenko et al. · Nature Communications · 2021 · 55 citations · Full text

Kipoi: accelerating the community exchange and reuse of predictive models for genomics

Žiga Avsec, Roman Kreuzhuber, Johnny Israeli et al. · 2018 · 32 citations · Full text

Engineering, Machine Learning, Machine Learning Tool +26

Accelerating Minimap2 for Accurate Long Read Alignment on GPUs

Harisankar Sadasivan, Milos Maric, Eric T. Dawson et al. · Journal of Biotechnology and Biomedicine · 2023 · 25 citations · Full text