The asparagus genome sheds light on the origin and evolution of a young Y chromosome

Alex Harkess, Jinsong Zhou, Chunyan Xu, +38

Nature Communications

An Atlas of Soybean Small RNAs Identifies Phased siRNAs from Hundreds of Coding Genes

Siwaret Arikit, Rui Xia, Atul Kakrana, +9

The Plant Cell

BiologySystems BiologyMedicineGeneticsSoybean Mirna Annotation +13

iSyTE 2.0: a database for expression-based gene discovery in the eye

Atul Kakrana, Andrian Yang, Deepti Anand, +6

Nucleic Acids Research

Ocular DiseaseEngineeringGeneticsTranscriptomics TechnologyGene Characterization +21

sPARTA: a parallelized pipeline for integrated analysis of plant miRNA and cleaved mRNA data sets, including new miRNA target-identification software

Atul Kakrana, Reza Hammond, Parth Patel, +2

Nucleic Acids Research

Plant 24-nt reproductive phasiRNAs from intramolecular duplex mRNAs in diverse monocots

Atul Kakrana, Sandra M. Mathioni, Kun Huang, +9

Genome Research

Plant GeneticsBotanyGeneticsReproductive PhasirnasMolecular Genetics +19

Compound mouse mutants of bZIP transcription factors Mafg and Mafk reveal a regulatory network of non-crystallin genes associated with cataract

Smriti A. Agrawal, Deepti Anand, Archana D. Siddam, +10

Human Genetics

Transcriptional RegulationProtein ExpressionMolecular RegulationGeneticsGene Expression +9

The RNA-binding protein Celf1 post-transcriptionally regulates p27Kip1 and Dnase2b to control fiber cell nuclear degradation in lens development

Archana D. Siddam, Carole Gautier‐Courteille, Linette Pérez-Campos, +9

PLoS Genetics

Transcriptional RegulationDevelopmental BiologySignal TransductionOphthalmologyRna-binding Protein Celf1 +13

The <i>dicer-like1</i> Homolog <i>fuzzy tassel</i> Is Required for the Regulation of Meristem Determinacy in the Inflorescence and Vegetative Growth in Maize

Beth E. Thompson, Christine Elizabeth Basham, Reza Hammond, +7

The Plant Cell

Plant GeneticsBotanyGeneticsMolecular GeneticsPlant Development +14

Composition and Expression of Conserved MicroRNA Genes in Diploid Cotton (Gossypium) Species

Lei Gong, Atul Kakrana, Siwaret Arikit, +2

Genome Biology and Evolution

Plant GeneticsBotanyGeneticsMolecular GeneticsGenomics +15

RNA sequencing-based transcriptomic profiles of embryonic lens development for cataract gene discovery

Deepti Anand, Atul Kakrana, Archana D. Siddam, +3

Human Genetics

Functional GenomicsDevelopmental BiologyGene Sequence AnnotationGeneticsGene Structure +8