Filip Lankaš

A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA

Richard Lavery, K. Zakrzewska, David L. Beveridge et al. · Nucleic Acids Research · 2009 · 309 citations · Full text

Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. I. Research Design and Results on d(CpG) Steps

David L. Beveridge, Gabriela Barreiro, K. Suzie Byun et al. · Biophysical Journal · 2004 · 270 citations · Full text

Dna Sequencing, Nucleic Acid Chemistry, Engineering +13

DNA Basepair Step Deformability Inferred from Molecular Dynamics Simulations

Filip Lankaš, Jörg Langowski, Thomas E. Cheatham · Biophysical Journal · 2003 · 263 citations · Full text

Dna Nanotechnology, Natural Sciences, Dna Replication +6

Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. II: Sequence Context Effects on the Dynamical Structures of the 10 Unique Dinucleotide Steps

Surjit B. Dixit, David L. Beveridge, David A. Case et al. · Biophysical Journal · 2005 · 231 citations · Full text

Dna Sequencing, Dna, Engineering +12

μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

Marco Pasi, John H. Maddocks, David L. Beveridge et al. · Nucleic Acids Research · 2014 · 213 citations · Full text

Engineering, Structural Bioinformatics, Genetics +18