Ignacio L. Ibarra

Squidpy: a scalable framework for spatial omics analysis

Giovanni Palla, Hannah Spitzer, Michal Klein et al. · Nature Methods · 2022 · 1.1K citations · Full text

Life Sciences, Bioinformatics, Visualization +12

An integrated cell atlas of the lung in health and disease

Lisa Sikkema, Ciro Ramírez-Suástegui, Daniel Strobl et al. · Nature Medicine · 2023 · 760 citations · Full text

Life Sciences, Bioinformatics, Cell Biology +17

SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis

Daniel Wendisch, Oliver Dietrich, Tommaso Mari et al. · Cell · 2021 · 543 citations · Full text

Veterinary Medicine, Immunology, Infectious Diseases +12

Predicting cellular responses to complex perturbations in high‐throughput screens

Mohammad Lotfollahi, Anna Klimovskaia Susmelj, Carlo De Donno et al. · Molecular Systems Biology · 2023 · 269 citations · Full text

Life Sciences, Bioinformatics, Systems Biology +14

Mechanistic insights into transcription factor cooperativity and its impact on protein-phenotype interactions

Ignacio L. Ibarra, Nele Merret Hollmann, Bernd Klaus et al. · Nature Communications · 2020 · 108 citations · Full text

Life Sciences, Genetics, Molecular Biology +13