Rui Qiao

Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry

Ngoc Hieu Tran, Rui Qiao, Lei Xin et al. · Nature Methods · 2018 · 361 citations

Systems Biology, Medicine, Mass Spectrometry +9

A streamlined platform for analyzing tera-scale DDA and DIA mass spectrometry data enables highly sensitive immunopeptidomics

Lei Xin, Rui Qiao, Xin Chen et al. · Nature Communications · 2022 · 101 citations · Full text

Computationally instrument-resolution-independent de novo peptide sequencing for high-resolution devices

Rui Qiao, Ngoc Hieu Tran, Lei Xin et al. · Nature Machine Intelligence · 2021 · 92 citations

Long-read Sequencing, High-resolution Devices, Natural Sciences +8

Personalized deep learning of individual immunopeptidomes to identify neoantigens for cancer vaccines

Ngoc Hieu Tran, Rui Qiao, Lei Xin et al. · Nature Machine Intelligence · 2020 · 41 citations

Systems Biology, Engineering, Machine Learning +10

Simple weakly supervised deep learning pipeline for detecting individual red-attacked trees in VHR remote sensing images

Rui Qiao, Ali Ghodsi, Honggan Wu et al. · Remote Sensing Letters · 2020 · 29 citations

Convolutional Neural Network, Individual Red-attacked Trees, Machine Learning +17