An integrated encyclopedia of DNA elements in the human genome

Ian Dunham, Anshul Kundaje, Shelley Force Aldred, +440

The Journal of the American Medical Association (JAMA) Network (American Medical Association)

Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation

Sushma Shivaswamy, Akshay Bhinge, Yongjun Zhao, +3

PLoS Biology

Transcriptional PerturbationGeneticsGenomic MechanismMolecular BiologyEpigenetics +17

Wide-ranging functions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis

Bum-Kyu Lee, Akshay Bhinge, Vishwanath R. Iyer

Nucleic Acids Research

Cell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells

Bum-Kyu Lee, Akshay Bhinge, Anna Battenhouse, +9

Genome Research

GeneticsCtcf SitesTranscriptomics TechnologyGene Regulatory NetworkGenomics +17

Genetic Correction of SOD1 Mutant iPSCs Reveals ERK and JNK Activated AP1 as a Driver of Neurodegeneration in Amyotrophic Lateral Sclerosis

Akshay Bhinge, Seema C. Namboori, Xiaoyu Zhang, +2

Stem Cell Reports

Mapping DNA-protein interactions in large genomes by sequence tag analysis of genomic enrichment

Jonghwan Kim, Akshay Bhinge, Xochitl C. Morgan, +1

Nature Methods

Large GenomesDna SequencingFunctional GenomicsMolecular EcologyDna-protein Interactions +13

NeuO: a Fluorescent Chemical Probe for Live Neuron Labeling

Jun Cheng Er, Cheryl Leong, Chai Lean Teoh, +13

Angewandte Chemie International Edition

EngineeringBiomedical EngineeringOptogeneticsNeurochipTissue Imaging +15

MiR-375 is Essential for Human Spinal Motor Neuron Development and May Be Involved in Motor Neuron Degeneration

Akshay Bhinge, Seema C. Namboori, Angela Bithell, +3

Stem Cells

Mapping the chromosomal targets of STAT1 by Sequence Tag Analysis of Genomic Enrichment (STAGE)

Akshay Bhinge, Jonghwan Kim, Ghia Euskirchen, +2

Genome Research

Mi <scp>R</scp> ‐135b is a direct <scp>PAX</scp> 6 target and specifies human neuroectoderm by inhibiting <scp>TGF</scp> ‐β/ <scp>BMP</scp> signaling

Akshay Bhinge, Jérémie Poschmann, Seema C. Namboori, +5

The EMBO Journal