Microbial Genomics · 2024 · 11 citations · 40 references
Life SciencesInfectious DiseasesMicrobiologyMolecular VirologyVirologyZoonotic Disease EpidemiologyAnimal VirusesViral ClassificationViral InfectionsViral ZoonosesVirus TaxonomyZoonotic VirusesDisease Transmission RoutesEmerging Zoonotic VirusesNovel Viral ZoonosesParamyxoviruses In WildlifeZoonotic Animal VirusesZoonotic Viral DiseasesZoonotic Viral Infections
=2) and an orthohepevirus. The novel paramyxovirus, tentatively named Hasua virus, was phylogenetically related to the zoonotic Langya virus and Mòjiāng virus. The novel orthonairoviruses, along with the potentially zoonotic Erve virus, fall within the shrew-borne Thiafora virus genogroup. The highest viral RNA loads of orthoparamyxoviruses were detected in the kidneys, in well-perfused organs for orthonairoviruses and in the liver and intestine for orthohepevirus, indicating potential transmission routes. Notably, several shrews were found to be coinfected with viruses from different families. Our study highlights the virus diversity present in shrews, not only in biodiversity-rich regions but also in areas influenced by human activity. This study warrants further research to characterize and assess the clinical implications and risk of these viruses and the importance of shrews as reservoirs in European ecosystems.
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Cutadapt removes adapter sequences from high-throughput sequencing reads
Marcel Martin · EMBnet journal · 2011 · 35.8K citations · Full text
Primer3—new capabilities and interfaces
Andreas Untergasser, Ioana Cutcutache, Triinu Kõressaar et al. · Nucleic Acids Research · 2012 · 9.8K citations · Full text