Scientific Reports · 2024 · 13 citations · 49 references
Life SciencesCancer BiologyMass Spectrometric AnalysisMetabolic StabilityMetabolomicsMass Spectrometry-based MetabolomicsMetabolite IdentificationMetabolite ProfilingMetabolite QuantificationTargeted MetabolomicsUntargeted MetabolomicsLiquid Chromatography-mass SpectrometryLiquid Chromatography-mass Spectrometry AnalysisMetabolite Identification ValidationMetabolomic Biomarker DiscoveryMetabolomic BiomarkersMetabolomic ScreeningUntargeted Metabolite ProfilingUntargeted Metabolomics Analysis
Tobacco smoking is the main etiological factor of lung cancer (LC), which can also cause metabolome disruption. This study aimed to investigate whether the observed metabolic shift in LC patients was also associated with their smoking status. Untargeted metabolomics profiling was applied for the initial screening of changes in serum metabolic profile between LC and chronic obstructive pulmonary disease (COPD) patients, selected as a non-cancer group. Differences in metabolite profiles between current and former smokers were also tested. Then, targeted metabolomics methods were applied to verify and validate the proposed LC biomarkers. For untargeted metabolomics, a single extraction-dual separation workflow was applied. The samples were analyzed using a liquid chromatograph-high resolution quadrupole time-of-flight mass spectrometer. Next, the selected metabolites were quantified using liquid chromatography-triple-quadrupole mass spectrometry. The acquired data confirmed that patients' stratification based on smoking status impacted the discriminating ability of the identified LC marker candidates. Analyzing a validation set of samples enabled us to determine if the putative LC markers were truly robust. It demonstrated significant differences in the case of four metabolites: allantoin, glutamic acid, succinic acid, and sphingosine-1-phosphate. Our research showed that studying the influence of strong environmental factors, such as tobacco smoking, should be considered in cancer marker research since it reduces the risk of false positives and improves understanding of the metabolite shifts in cancer patients.
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Rebecca L. Siegel, Kimberly D. Miller, Hannah E. Fuchs et al. · CA A Cancer Journal for Clinicians · 2022 · 18.2K citations · Full text
MS-DIAL: data-independent MS/MS deconvolution for comprehensive metabolome analysis
Hiroshi Tsugawa, Tomáš Čajka, Tobias Kind et al. · Nature Methods · 2015 · 3.4K citations · Full text
Life Sciences, Biochemistry, Mass Spectrometric Analysis +13
Metabolomics – the link between genotypes and phenotypes
Oliver Fiehn · Plant Molecular Biology · 2002 · 3.4K citations
Metabolomics--the link between genotypes and phenotypes.
Oliver Fiehn · PubMed · 2002 · 1.5K citations