FoldPAthreader: predicting protein folding pathway using a novel folding force field model derived from known protein universe

Highly accurate protein structure prediction with AlphaFold

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Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features

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AlphaFold Protein Structure Database: massively expanding the structural coverage of protein-sequence space with high-accuracy models

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Evolutionary-scale prediction of atomic-level protein structure with a language model

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Engineering, Machine Learning, Structural Bioinformatics +17

Fast and accurate protein structure search with Foldseek

Michel van Kempen, Stephanie Kim, Charlotte Tumescheit et al. · Nature Biotechnology · 2023 · 2K citations · Full text