Cell · 2024 · 106 citations · 146 references
Life SciencesGeneticsMicrobiologyMedical MicrobiologyMicrobial GeneticsMicrobiome ResearchFungal GeneticsFungal GenomicsFungal InfectionsGut MicrobiomeGut MicrobiotaPathogen GenomicsBiotechnological Fungal GenomicsFungal Genome SequencingFungal MetagenomicsFungal Microbiome AnalysisGut Microbiome DiversityHuman Gut MetagenomicsMycobiota DiversityPathogenicity Genomics
146
Fast and accurate short read alignment with Burrows–Wheeler transform
Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text
Fast gapped-read alignment with Bowtie 2
Ben Langmead, Steven L. Salzberg · Nature Methods · 2012 · 61.1K citations