Nature as blueprint: Global phenotype engineering of CHO production cells based on a multi-omics comparison with plasma cells

BLAST+: architecture and applications

Christiam Camacho, George Coulouris, Vahram Avagyan et al. · BMC Bioinformatics · 2009 · 23.2K citations · Full text

Life Sciences, Bioinformatics, Biology +13

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

Jürgen Cox, Matthias Mann · Nature Biotechnology · 2008 · 15.7K citations

Life Sciences, Biochemistry, Mass Spectrometric Analysis +15

The Perseus computational platform for comprehensive analysis of (prote)omics data

Stefka Tyanova, Tikira Temu, Pavel Sinitcyn et al. · Nature Methods · 2016 · 8.9K citations

Life Sciences, Bioinformatics, Molecular Biology +10

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

Jürgen Cox, Nadin Neuhauser, Annette Michalski et al. · Journal of Proteome Research · 2011 · 5.9K citations · Full text

Life Sciences, Biochemistry, Bioinformatics +17

STRING 8--a global view on proteins and their functional interactions in 630 organisms

Lars Juhl Jensen, Michael Kuhn, Mitchell Stark et al. · Nucleic Acids Research · 2008 · 2.5K citations · Full text

Life Sciences, Bioinformatics, Biology +17