Concepedia

In vivo detection of DNA secondary structures using permanganate/S1 footprinting with direct adapter ligation and sequencing (PDAL-Seq)

Angelika Lahnsteiner, Sarah J. C. Craig, Kaivan Kamali, Bernadette Weissensteiner, Barbara C. McGrath, Angela Risch, Kateryna D. Makova

Methods in enzymology on CD-ROM/Methods in enzymology · 2024 · 13 citations · 41 references

DOI

Concepts

References

41

Fast and accurate short read alignment with Burrows–Wheeler transform

Heng Li, Richard Durbin · Bioinformatics · 2009 · 62.8K citations · Full text

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BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan, Ira M. Hall · Bioinformatics · 2010 · 30.4K citations · Full text

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Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang, Tao Liu, Clifford A. Meyer et al. · Genome biology · 2008 · 19.9K citations · Full text

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Twelve years of SAMtools and BCFtools

Petr Danecek, James Bonfield, Jennifer Liddle et al. · GigaScience · 2021 · 15.9K citations · Full text

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Molecular Structure of Nucleic Acids: A Structure for Deoxyribose Nucleic Acid

James Dewey Watson, Francis Crick · Nature · 1953 · 13.2K citations

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